CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Minc17549
(
Meloidogyne incognita
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
Minc17549
T23183_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc17549
La
130
187
LRTQIEYYFSSDNLQKDFFLRRKMDAEGFLPLELIASFPRVRSLTYDQSFIVKCLRGS
Links
Other
La
family RBPs
Other
Meloidogyne incognita
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Minc10117
Meloidogyne incognita
Minc10117
N
0.845
CJA02747
Caenorhabditis japonica
CJA02747
N
0.724
larp-1
Caenorhabditis elegans
R144.7
N
0.707
CRE25062
Caenorhabditis remanei
CRE25062
N
0.707
CBG16526
Caenorhabditis briggsae
CBG16526
N
0.707
Ppa-larp-1
Pristionchus pacificus
PPA28527
N
0.707