CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CJA02747
(
Caenorhabditis japonica
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
CJA02747
T22675_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA02747
La
563
620
VRNQIEYYFSKDNLQKDFFLRRKMSPEGYLPVALIASFPRVRTLTEDQTLIADALRDS
Links
Other
La
family RBPs
Other
Caenorhabditis japonica
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG16526
Caenorhabditis briggsae
CBG16526
N
0.862
CRE25062
Caenorhabditis remanei
CRE25062
N
0.845
larp-1
Caenorhabditis elegans
R144.7
N
0.828
Ppa-larp-1
Pristionchus pacificus
PPA28527
N
0.741
Minc17549
Meloidogyne incognita
Minc17549
N
0.724
Minc10117
Meloidogyne incognita
Minc10117
N
0.707