CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FBgn0261618
(
Drosophila melanogaster
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
FBgn0261618
T22934_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0088622
La
25
82
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
FBpp0088624
La
25
82
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
FBpp0290398
La
733
790
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
FBpp0290399
La
25
82
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
FBpp0297480
La
469
526
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
FBpp0297481
La
733
790
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
FBpp0297482
La
733
790
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
Links
Other
La
family RBPs
Other
Drosophila melanogaster
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL009073
Aedes aegypti
AAEL009073
N
0.741
AGAP005291
Anopheles gambiae
AGAP005291
N
0.741
GA27083-RA
Drosophila pseudoobscura
FBgn0248454
N
0.948
GE10516
Drosophila yakuba
FBgn0228374
N
1.000
GF16129
Drosophila ananassae
FBgn0093151
N
0.948
GG12072
Drosophila erecta
FBgn0104364
N
1.000
GH13999
Drosophila grimshawi
FBgn0121475
N
0.931
GI24848
Drosophila mojavensis
FBgn0147568
N
0.948
GJ24490
Drosophila virilis
FBgn0211570
N
0.948
GK22522
Drosophila willistoni
FBgn0224499
N
0.897
GL23866
Drosophila persimilis
FBgn0161456
N
0.948
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.700
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.717
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.700
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.700