BGIOSIBCE034058 (Oryza indica)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		BGIOSIBCE034058 T23314_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE034058 La 220 278
BGIOSIBCE034058 RRM 309 351
BGIOSIBCE034058 RRM 345 389

Links

Other La,RRM family RBPs
Other Oryza indica RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE036105 Oryza indica BGIOSIBCE036105 N 0.735
BRADI4G20900 Brachypodium distachyon BRADI4G20900 N 0.887
BRADI4G40040 Brachypodium distachyon BRADI4G40040 N 0.745
GRMZM2G072339 Zea mays GRMZM2G072339 N 0.818
GRMZM2G171518 Zea mays GRMZM2G171518 N 0.702
LOC_Os11g14300 Oryza sativa LOC_Os11g14300 N 0.864
LOC_Os12g12360 Oryza sativa LOC_Os12g12360 N 0.735
SB05G006890 Sorghum bicolor Sb05g006890 N 0.811
SB08G007220 Sorghum bicolor Sb08g007220 N 0.728