SB08G007220 (Sorghum bicolor)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		Sb08g007220 T23517_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb08g007220.1 La 139 198
Sb08g007220.1 RRM 229 270
Sb08g007220.1 RRM 277 312

Links

Other La,RRM family RBPs
Other Sorghum bicolor RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G171518 Zea mays GRMZM2G171518 N 0.950
BRADI4G40040 Brachypodium distachyon BRADI4G40040 N 0.899
LOC_Os12g12360 Oryza sativa LOC_Os12g12360 N 0.884
BGIOSIBCE036105 Oryza indica BGIOSIBCE036105 N 0.884
GRMZM2G072339 Zea mays GRMZM2G072339 N 0.804
SB05G006890 Sorghum bicolor Sb05g006890 N 0.797
BRADI4G20900 Brachypodium distachyon BRADI4G20900 N 0.739
BGIOSIBCE034058 Oryza indica BGIOSIBCE034058 N 0.728