LOC_Os12g12360 (Oryza sativa)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		LOC_Os12g12360 T23497_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g12360.1 La 123 182
LOC_Os12g12360.1 RRM 213 253
LOC_Os12g12360.1 RRM 261 296
LOC_Os12g12360.2 La 123 182
LOC_Os12g12360.2 RRM 213 253
LOC_Os12g12360.2 RRM 261 296

Links

Other La,RRM family RBPs
Other Oryza sativa RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE036105 Oryza indica BGIOSIBCE036105 N 1.000
SB08G007220 Sorghum bicolor Sb08g007220 N 0.884
BRADI4G40040 Brachypodium distachyon BRADI4G40040 N 0.870
GRMZM2G171518 Zea mays GRMZM2G171518 N 0.835
GRMZM2G072339 Zea mays GRMZM2G072339 N 0.797
SB05G006890 Sorghum bicolor Sb05g006890 N 0.790
BRADI4G20900 Brachypodium distachyon BRADI4G20900 N 0.739
BGIOSIBCE034058 Oryza indica BGIOSIBCE034058 N 0.735