TERG_04136 (Trichophyton rubrum)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 TERG_04136 T23947_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TERG_04136T0 PUF 624 657
TERG_04136T0 PUF 659 693
TERG_04136T0 PUF 696 730
TERG_04136T0 PUF 732 766
TERG_04136T0 PUF 770 802
TERG_04136T0 PUF 804 833
TERG_04136T0 PUF 840 874
TERG_04136T0 PUF 882 912

Links

Other PUF family RBPs
Other Trichophyton rubrum RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_031910 Aspergillus clavatus CADACLAG00001932 N 0.775
AFLA_080970 Aspergillus flavus CADAFLAG00000878 N 0.780
AFUA_1G02510 Aspergillus fumigatus CADAFUAG00009000 N 0.790
An01g05700 Aspergillus niger CADANGAG00000562 N 0.775
ANIA_10071 Aspergillus nidulans CADANIAG00002391 N 0.726
AO090005000845 Aspergillus oryzae CADAORAG00002798 N 0.780
ARB_07066 Arthroderma benhamiae ARB_07066 N 1.000
ATEG_04843 Aspergillus terreus CADATEAG00009935 N 0.765
BDBG_05830 Blastomyces dermatitidis BDBG_05830 N 0.793
CIMG_11716 Coccidioides immitis CIMG_11716 N 0.790
CPSG_00792 Coccidioides posadasii CPSG_00792 N 0.790
fgenesh1_pm.00009_#_276 Aspergillus carbonarius fgenesh1_pm.00009_#_276 N 0.775
HCAG_06968 Histoplasma capsulatum HCAG_06968 N 0.789
MCYG_06825 Microsporum canis MCYG_06825 N 0.993
MGYG_03789 Microsporum gypseum MGYG_03789 N 0.951
NFIA_022100 Neosartorya fischeri CADNFIAG00001651 N 0.783
PABG_07309 Paracoccidioides brasiliensis PABG_07309 N 0.787
Pc22g21770 Penicillium chrysogenum Pc22g21770 N 0.745
PMAA_095200 Penicillium marneffei PMAA_095200 N 0.756
TEQG_02915 Trichophyton equinum TEQG_02915 N 0.996
TESG_00225 Trichophyton tonsurans TESG_00225 N 0.996
TRV_05699 Trichophyton verrucosum TRV_05699 N 1.000