MDP0000265231 (Malus x domestica)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 MDP0000265231 T25196_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000265231 PUF 644 678
MDP0000265231 PUF 680 714
MDP0000265231 PUF 716 750
MDP0000265231 PUF 752 786
MDP0000265231 PUF 788 823
MDP0000265231 PUF 825 859
MDP0000265231 PUF 861 895
MDP0000265231 PUF 903 937

Links

Other PUF family RBPs
Other Malus x domestica RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000010611 Ciona intestinalis ENSCING00000010611 N 0.000
fgenesh2_kg.10_#_112_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.10_#_112_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.12_#_635_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.12_#_635_#_11486_1_CFPN N 0.000
fgenesh2_kg.12_#_754_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.12_#_754_#_11486_1_CFPN N 0.000
fgenesh2_kg.14_#_548_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.14_#_548_#_11486_1_CFPN N 0.000
fgenesh2_kg.15_#_627_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.15_#_627_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.17_#_294_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.17_#_294_#_11486_1_CFPN N 0.000
fgenesh2_kg.18_#_121_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.18_#_121_#_11486_1_CFPN N 0.000
fgenesh2_kg.1_#_1210_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.1_#_1210_#_11486_1_CFPN N 0.000
fgenesh2_kg.20_#_21_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.20_#_21_#_11486_1_CFPN N 0.000
fgenesh2_kg.2_#_266_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.2_#_266_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.3_#_1118_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.3_#_1118_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.4_#_2144_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_2144_#_11486_1_CFPN N 0.000
fgenesh2_kg.4_#_2864_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_2864_#_11486_1_CFPN N 0.000
fgenesh2_kg.5_#_1694_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.5_#_1694_#_11486_1_CFPN N 0.000
fgenesh2_kg.5_#_495_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.5_#_495_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.6_#_1126_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.6_#_1126_#_11486_1_CFPN N 0.000
fgenesh2_kg.7_#_2034_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.7_#_2034_#_11486_1_CFPN N 0.000
fgenesh2_kg.7_#_456_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.7_#_456_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.8_#_1276_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.8_#_1276_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.8_#_1578_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.8_#_1578_#_11486_1_CFPN N 0.000
fgenesh2_kg.9_#_513_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.9_#_513_#_11486_1_CFPN N 0.000
K08D12.3 Caenorhabditis elegans K08D12.3 N 0.000