RBM5 (Echinops telfairi)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSETEG00000012773 T25557_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.953
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.953
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000010359 RRM 100 171
ENSETEP00000010359 RanBP ZF 181 210
ENSETEP00000010359 RRM 236 302

Links

Other RanBP ZF,RRM family RBPs
Other Echinops telfairi RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A0JMV4 Xenopus laevis A0JMV4 I 0.841
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.953
AAH77408 Xenopus laevis AAH77408 I 0.836
AAI26020 Xenopus laevis AAI26020 I 0.841
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.953
LOC100052535 Equus caballus ENSECAG00000020447 I 0.953
Q6DDU9 Xenopus laevis Q6DDU9 I 0.836
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.953
RBM5 Sus scrofa ENSSSCG00000011395 I 0.953
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.866
RBM5 Microcebus murinus ENSMICG00000016179 N 0.944
RBM5 Sorex araneus ENSSARG00000009724 I 0.750
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.953
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.948
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.897
RBM5 Takifugu rubripes ENSTRUG00000008292 I 0.719
RBM5 Tarsius syrichta ENSTSYG00000004158 I 0.721
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.924
rbm5 Xenopus tropicalis ENSXETG00000007303 I 0.819
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.951
RBM5 Felis catus ENSFCAG00000014639 N 0.873
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.859
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.953
RBM5 Procavia capensis ENSPCAG00000005459 I 0.756
RBM5 Gorilla gorilla ENSGGOG00000014490 I 0.855
RBM5 Gallus gallus ENSGALG00000004626 I 0.891
RBM5 Homo sapiens ENSG00000003756 D 0.953
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.953
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.953
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.953
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.872
RBM5 Canis familiaris ENSCAFG00000010866 I 0.953
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.953
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.897
RBM5 Oryzias latipes ENSORLG00000003369 I 0.715
RBM5 Ochotona princeps ENSOPRG00000015154 I 0.734
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.931
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.936
Rbm5 Mus musculus ENSMUSG00000032580 I 0.953
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.936
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.953
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.948
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.852
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.953