RBM5 (Ochotona princeps)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSOPRG00000015154 T25623_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.769
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.769
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000013858 RRM 134 172
ENSOPRP00000013858 RanBP ZF 181 210
ENSOPRP00000013858 RRM 233 302

Links

Other RanBP ZF,RRM family RBPs
Other Ochotona princeps RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.769
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.769
LOC100052535 Equus caballus ENSECAG00000020447 I 0.769
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.706
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.769
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.763
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.769
RBM5 Otolemur garnettii ENSOGAG00000004205 N 0.820
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.780
RBM5 Sus scrofa ENSSSCG00000011395 I 0.769
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.769
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.721
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.726
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.727
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.734
RBM5 Dasypus novemcinctus ENSDNOG00000011756 N 0.899
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.769
Rbm5 Mus musculus ENSMUSG00000032580 I 0.769
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.763
RBM5 Canis familiaris ENSCAFG00000010866 I 0.796
RBM5 Choloepus hoffmanni ENSCHOG00000009429 I 0.820
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.769
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.769
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.763
RBM5 Echinops telfairi ENSETEG00000012773 I 0.734
RBM5 Homo sapiens ENSG00000003756 D 0.769
RBM5 Gallus gallus ENSGALG00000004626 I 0.726
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.769
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.726
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.763
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.769
RBM5 Microcebus murinus ENSMICG00000016179 N 0.732
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.769