SB02G032170 (Sorghum bicolor)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		Sb02g032170 T25749_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb02g032170.1 RRM 14 92
Sb02g032170.1 RanBP ZF 142 173
Sb02g032170.1 RanBP ZF 215 243

Links

Other RanBP ZF,RRM family RBPs
Other Sorghum bicolor RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30100.m000780 Ricinus communis 30100.m000780 N 0.900
AC185415.3_FG005 Zea mays AC185415.3_FG005 N 0.979
AC233865.1_FG006 Zea mays AC233865.1_FG006 N 0.986
B9HI59_POPTR Populus trichocarpa POPTR_0008s08490 N 0.843
B9HY23_POPTR Populus trichocarpa POPTR_0010s17780 N 0.864
BGIOSIBCE024476 Oryza indica BGIOSIBCE024476 N 0.964
BGIOSIBCE029383 Oryza indica BGIOSIBCE029383 N 0.957
BRADI1G19280 Brachypodium distachyon BRADI1G19280 N 0.929
cassava6410.valid.m1 Manihot esculenta cassava6410.valid.m1 N 0.893
Cucsa.338570 Cucumis sativus Cucsa.338570 N 0.886
e_gw1.19.421.1 Selaginella moellendorfii e_gw1.19.421.1 N 0.821
Glyma11g11060.1 Glycine max Glyma11g11060.1 N 0.887
Glyma12g03260.1 Glycine max Glyma12g03260.1 N 0.887
GSVIVG00010206001 Vitis vinifera GSVIVG00010206001 N 0.914
LjSGA_030792.1 Lotus japonicus LjSGA_030792.1 N 0.700
LOC_Os07g19560 Oryza sativa LOC_Os07g19560 N 0.964
LOC_Os09g12800 Oryza sativa LOC_Os09g12800 N 0.957
MDP0000121074 Malus x domestica MDP0000121074 N 0.893
MDP0000299312 Malus x domestica MDP0000299312 N 0.893
mgf016255m Mimulus guttatus mgf016255m N 0.900
PDK_20s1466551g001 Phoenix dactylifera PDK_20s1466551g001 N 0.879
PK07290.1 Cannabis sativa PK07290.1 N 0.894
ppa006646m Prunus persica ppa006646m N 0.887
ppa009031m Prunus persica ppa009031m N 0.887
TAF15 Arabidopsis thaliana AT1G50300-TAIR-G N 0.864
XM_002894200.1 Arabidopsis lyrata scaffold_104754.1 N 0.864