30100.m000780 (Ricinus communis)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		30100.m000780 T25765_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
30100.m000780 RRM 16 94
30100.m000780 RanBP ZF 150 181
30100.m000780 RanBP ZF 217 245

Links

Other RanBP ZF,RRM family RBPs
Other Ricinus communis RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava6410.valid.m1 Manihot esculenta cassava6410.valid.m1 N 0.950
GSVIVG00010206001 Vitis vinifera GSVIVG00010206001 N 0.936
ppa009031m Prunus persica ppa009031m N 0.929
ppa006646m Prunus persica ppa006646m N 0.929
Cucsa.338570 Cucumis sativus Cucsa.338570 N 0.921
MDP0000299312 Malus x domestica MDP0000299312 N 0.921
MDP0000121074 Malus x domestica MDP0000121074 N 0.921
B9HY23_POPTR Populus trichocarpa POPTR_0010s17780 N 0.914
Glyma11g11060.1 Glycine max Glyma11g11060.1 N 0.901
Glyma12g03260.1 Glycine max Glyma12g03260.1 N 0.901
SB02G032170 Sorghum bicolor Sb02g032170 N 0.900
LOC_Os07g19560 Oryza sativa LOC_Os07g19560 N 0.886
BGIOSIBCE024476 Oryza indica BGIOSIBCE024476 N 0.886
AC233865.1_FG006 Zea mays AC233865.1_FG006 N 0.886
B9HI59_POPTR Populus trichocarpa POPTR_0008s08490 N 0.886
PK07290.1 Cannabis sativa PK07290.1 N 0.879
AC185415.3_FG005 Zea mays AC185415.3_FG005 N 0.879
BGIOSIBCE029383 Oryza indica BGIOSIBCE029383 N 0.879
LOC_Os09g12800 Oryza sativa LOC_Os09g12800 N 0.879
mgf016255m Mimulus guttatus mgf016255m N 0.864
XM_002894200.1 Arabidopsis lyrata scaffold_104754.1 N 0.857
TAF15 Arabidopsis thaliana AT1G50300-TAIR-G N 0.857
PDK_20s1466551g001 Phoenix dactylifera PDK_20s1466551g001 N 0.850
BRADI1G19280 Brachypodium distachyon BRADI1G19280 N 0.850
e_gw1.19.421.1 Selaginella moellendorfii e_gw1.19.421.1 N 0.814
LjSGA_030792.1 Lotus japonicus LjSGA_030792.1 N 0.714