CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_06188
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_06188
T29764_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_06188T0
RRM
446
498
EIGEECGEKYGRVERLYVDVNTRQVFIKFTDQVSALRAVNALDGRIFNGNEVR
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_Genewise1.C_70446
Cryphonectria parasitica
estExt_Genewise1.C_70446
N
0.755
e_gw1.5.1248.1
Nectria haematococca
e_gw1.5.1248.1
N
0.792
fgenesh1_pm.C_scaffold_11000127
Trichoderma atroviride
fgenesh1_pm.C_scaffold_11000127
N
0.755
fgenesh1_pm.C_scaffold_23000036
Trichoderma reesei
fgenesh1_pm.C_scaffold_23000036
N
0.755
FGSG_10088
Fusarium graminearum
FGSG_10088
N
0.736
FOXG_05320
Fusarium oxysporum
FOXG_05320
N
0.736
FVEG_02810
Fusarium verticillioides
FVEG_02810
N
0.736
GLRG_07477
Colletotrichum graminicola
GLRG_07477
N
0.811
gw1.3.233.1
Trichoderma virens
gw1.3.233.1
N
0.755
MCYG_01323
Microsporum canis
MCYG_01323
N
0.732
MGYG_01864
Microsporum gypseum
MGYG_01864
N
0.714
TEQG_06875
Trichophyton equinum
TEQG_06875
N
0.714
TERG_04597
Trichophyton rubrum
TERG_04597
N
0.714
TESG_01518
Trichophyton tonsurans
TESG_01518
N
0.714
VDAG_00222
Verticillium dahliae
VDAG_00222
N
0.736
VDBG_00609
Verticillium albo atrum
VDBG_00609
N
0.736