fgenesh1_pm.C_scaffold_11000127 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_11000127 T52065_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_11000127 RRM 458 504

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_23000036 Trichoderma reesei fgenesh1_pm.C_scaffold_23000036 N 0.979
gw1.3.233.1 Trichoderma virens gw1.3.233.1 N 0.936
GLRG_07477 Colletotrichum graminicola GLRG_07477 N 0.824
FOXG_05320 Fusarium oxysporum FOXG_05320 N 0.820
FVEG_02810 Fusarium verticillioides FVEG_02810 N 0.820
FGSG_10088 Fusarium graminearum FGSG_10088 N 0.820
estExt_Genewise1.C_70446 Cryphonectria parasitica estExt_Genewise1.C_70446 N 0.780
VDAG_00222 Verticillium dahliae VDAG_00222 N 0.760
VDBG_00609 Verticillium albo atrum VDBG_00609 N 0.760
e_gw1.5.1248.1 Nectria haematococca e_gw1.5.1248.1 N 0.755
MGG_06188 Magnaporthe oryzae MGG_06188 N 0.755