amel4_ncbi_hmm3241 (Tribolium castaneum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm3241 T31906_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF2
M352_0.6 		Homo sapiens AGSAGAGUA SELEX
Cook et al.(2011)
953_7543047 		0.817
SRSF2
M332_0.6 		Homo sapiens UGUUCSAGWU SELEX
Cook et al.(2011)
791_10094314 		0.817
SRSF2
M274_0.6 		Homo sapiens GUUCGAGUA SELEX
Cook et al.(2011)
244_7543047 		0.817
SRSF2
M070_0.6 		Homo sapiens GGAGWD RNAcompete
Ray et al.(2013)
RNCMPT00072 		0.817
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm3241 RRM 16 86

Links

Other RRM family RBPs
Other Tribolium castaneum RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9H2A6_POPTR Populus trichocarpa POPTR_0004s06470 N 0.000
Cucsa.047830 Cucumis sativus Cucsa.047830 N 0.000
Glyma08g10330.1 Glycine max Glyma08g10330.1 N 0.000
LjT25I18.20.nc Lotus japonicus LjT25I18.20.nc N 0.000
MDP0000212912 Malus x domestica MDP0000212912 N 0.000
MDP0000384450 Malus x domestica MDP0000384450 N 0.000
MDP0000408310 Malus x domestica MDP0000408310 N 0.000
Medtr2g024360 Medicago truncatula Medtr2g024360 N 0.000
mgf002683m Mimulus guttatus mgf002683m N 0.000
PDK_20s1575061g002 Phoenix dactylifera PDK_20s1575061g002 N 0.000
PK14411.1 Cannabis sativa PK14411.1 N 0.000
ppa002887m Prunus persica ppa002887m N 0.000