CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_06160
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00000843
T33727_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00000843
RRM
104
179
LFVARLSYDVKESDLEREFGRFGPIERIRIVKDNVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVL
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB04539.1
Alternaria brassicicola
AB04539.1
N
0.756
ACLA_016460
Aspergillus clavatus
CADACLAG00000809
N
0.895
AFLA_094660
Aspergillus flavus
CADAFLAG00009151
N
0.974
An14g04950
Aspergillus niger
CADANGAG00011432
N
0.987
ANIA_06903
Aspergillus nidulans
CADANIAG00007705
N
0.817
AO090120000497
Aspergillus oryzae
CADAORAG00011610
N
0.974
BDBG_08305
Blastomyces dermatitidis
BDBG_08305
N
0.857
CIMG_09358
Coccidioides immitis
CIMG_09358
N
0.842
CPSG_03908
Coccidioides posadasii
CPSG_03908
N
0.842
estExt_Genewise1Plus.C_230422
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_230422
N
0.756
fgenesh1_pg.00710_#_132
Aspergillus carbonarius
fgenesh1_pg.00710_#_132
N
0.947
HCAG_02503
Histoplasma capsulatum
HCAG_02503
N
0.844
MCYG_03975
Microsporum canis
MCYG_03975
N
0.868
MGYG_07680
Microsporum gypseum
MGYG_07680
N
0.882
NFIA_073580
Neosartorya fischeri
CADNFIAG00007026
N
0.987
Pc21g03370
Penicillium chrysogenum
Pc21g03370
N
0.714
PMAA_033920
Penicillium marneffei
PMAA_033920
N
0.921
PTRG_05753
Pyrenophora tritici repentis
PTRG_05753
N
0.744
TEQG_03381
Trichophyton equinum
TEQG_03381
N
0.882
TERG_08496
Trichophyton rubrum
TERG_08496
N
0.882