CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_07680
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_07680
T29848_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_07680T0
RRM
104
178
LFVSRLSYDVKEADLEREFGRFGPIERIRIVKDTQNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRAL
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TEQG_03381
Trichophyton equinum
TEQG_03381
N
0.987
TERG_08496
Trichophyton rubrum
TERG_08496
N
0.987
MCYG_03975
Microsporum canis
MCYG_03975
N
0.973
PMAA_033920
Penicillium marneffei
PMAA_033920
N
0.933
BDBG_08305
Blastomyces dermatitidis
BDBG_08305
N
0.909
AO090120000497
Aspergillus oryzae
CADAORAG00011610
N
0.908
AFLA_094660
Aspergillus flavus
CADAFLAG00009151
N
0.908
CPSG_03908
Coccidioides posadasii
CPSG_03908
N
0.907
CIMG_09358
Coccidioides immitis
CIMG_09358
N
0.907
An14g04950
Aspergillus niger
CADANGAG00011432
N
0.895
NFIA_073580
Neosartorya fischeri
CADNFIAG00007026
N
0.895
HCAG_02503
Histoplasma capsulatum
HCAG_02503
N
0.883
ATEG_06160
Aspergillus terreus
CADATEAG00000843
N
0.882
fgenesh1_pg.00710_#_132
Aspergillus carbonarius
fgenesh1_pg.00710_#_132
N
0.868
ACLA_016460
Aspergillus clavatus
CADACLAG00000809
N
0.829
ANIA_06903
Aspergillus nidulans
CADANIAG00007705
N
0.793
estExt_Genewise1Plus.C_230422
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_230422
N
0.769
AB04539.1
Alternaria brassicicola
AB04539.1
N
0.769
PTRG_05753
Pyrenophora tritici repentis
PTRG_05753
N
0.756
Pc21g03370
Penicillium chrysogenum
Pc21g03370
N
0.701
GSTUMT00005871001
Tuber melanosporum
GSTUMT00005871001
N
0.700