ENSMEUG00000003272 (Macropus eugenii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMEUG00000003272 T38173_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
sf3b4
M195_0.6 		Danio rerio CAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00224 		0.924
Smp_067420
M201_0.6 		Schistosoma mansoni DWWUUUU RNAcompete
Ray et al.(2013)
RNCMPT00232 		0.832
sap-49
M261_0.6 		Caenorhabditis elegans CGUGUGAG SELEX
Cook et al.(2011)
145_9163526 		0.762
estExt_gwp_gw1.C_700168
M205_0.6 		Physcomitrella patens WUGGAG RNAcompete
Ray et al.(2013)
RNCMPT00237 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000002983 RRM 15 85
ENSMEUP00000002983 RRM 102 169

Links

Other RRM family RBPs
Other Macropus eugenii RBPs

119 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_210004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_210004 N 0.000
estExt_fgenesh1_pg.C_370009 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_370009 N 0.000
fgenesh1_pg.C_scaffold_11000002 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_11000002 N 0.000
fgenesh1_pg.C_scaffold_13000211 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_13000211 N 0.000
fgenesh1_pg.C_scaffold_18000002 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_18000002 N 0.000
fgenesh1_pg.C_scaffold_24000143 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_24000143 N 0.000
fgenesh1_pg.C_scaffold_28000061 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_28000061 N 0.000
fgenesh1_pg.C_scaffold_30000058 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_30000058 N 0.000
fgenesh1_pg.C_scaffold_3000356 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_3000356 N 0.000
fgenesh1_pg.C_scaffold_38000003 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_38000003 N 0.000
fgenesh1_pg.C_scaffold_38000005 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_38000005 N 0.000
fgenesh1_pg.C_scaffold_40000010 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_40000010 N 0.000
fgenesh1_pg.C_scaffold_40000018 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_40000018 N 0.000
fgenesh1_pg.C_scaffold_50000002 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_50000002 N 0.000
fgenesh1_pg.C_scaffold_5000047 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_5000047 N 0.000
fgenesh1_pg.C_scaffold_5000115 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_5000115 N 0.000