CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF2
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000005541
T39836_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000004957
RRM
1
30
CCFVTFYTRKAALEAQNALHNIKTLPGXXX
ENSOGAP00000004957
RRM
50
118
LFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCS
ENSOGAP00000004957
RRM
357
425
LFIYHLPQEFGDQDILQMFMPFGNVISAKVFLDKHTNLSKCFGFVSANDPEDASASIKAIKGYMEKKEL
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF1
Pteropus vampyrus
ENSPVAG00000007340
N
0.794
CELF1
Tarsius syrichta
ENSTSYG00000003866
N
0.794
CELF2
Choloepus hoffmanni
ENSCHOG00000002945
N
0.712
CELF2
Monodelphis domestica
ENSMODG00000016763
N
0.832
CELF2
Tarsius syrichta
ENSTSYG00000005118
N
0.853
CELF2
Vicugna pacos
ENSVPAG00000009360
N
0.853