CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF2
(
Choloepus hoffmanni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCHOG00000002945
T35260_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000002609
RRM
1
68
IPRSWSEKEMKEIFEHYGAIYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGXXX
ENSCHOP00000002609
RRM
88
156
LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCS
ENSCHOP00000002609
RRM
397
467
LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Choloepus hoffmanni
RBPs
90 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.944
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.944
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.944
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.944
Celf2
Mus musculus
ENSMUSG00000002107
N
0.944
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.944
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.944
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.944
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.944
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.944
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.944
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.944
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.944
CELF2
Homo sapiens
ENSG00000048740
N
0.944
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.944
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.944
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.944
CELF2
Equus caballus
ENSECAG00000006649
N
0.944
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.944
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.944
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.944
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.939
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.939
AAB09041
Xenopus laevis
AAB09041
N
0.939
AAH45035
Xenopus laevis
AAH45035
N
0.939
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.920
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.916
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.916
celf2
Danio rerio
ENSDARG00000002131
N
0.916
ACH69783
Xenopus laevis
ACH69783
N
0.912
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
0.878
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.878
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.878
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
0.878
CELF1
Meleagris gallopavo
ENSMGAG00000010629
N
0.878
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.878
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.873
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.870
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.869
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.869
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.869
CELF1
Homo sapiens
ENSG00000149187
N
0.869
CELF1
Equus caballus
ENSECAG00000007741
N
0.869
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.869
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.869
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.869
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.869
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.869
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.869
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.869
Celf1
Mus musculus
ENSMUSG00000005506
N
0.859
O57406
Xenopus laevis
O57406
N
0.859
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.859
AAC41243
Xenopus laevis
AAC41243
N
0.859
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.859
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.859
AAI08575
Xenopus laevis
AAI08575
N
0.859
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.854
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.854
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.854
celf1
Danio rerio
ENSDARG00000005315
N
0.845
AAH57743
Xenopus laevis
AAH57743
N
0.845
AAH70706
Xenopus laevis
AAH70706
N
0.845
Q6PF35
Xenopus laevis
Q6PF35
N
0.845
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.841
CELF2
Oryzias latipes
ENSORLG00000003894
N
0.836
CELF2
Tetraodon nigroviridis
ENSTNIG00000016009
N
0.836
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.836
CELF2
Takifugu rubripes
ENSTRUG00000016905
N
0.832
CELF2
Monodelphis domestica
ENSMODG00000016763
N
0.808
CELF2
Vicugna pacos
ENSVPAG00000009360
N
0.803
CELF2
Tarsius syrichta
ENSTSYG00000005118
N
0.803
CELF2
Procavia capensis
ENSPCAG00000010882
N
0.803
CELF2
Macropus eugenii
ENSMEUG00000015276
N
0.798
CELF2
Tursiops truncatus
ENSTTRG00000014665
N
0.784
CELF1
Gasterosteus aculeatus
ENSGACG00000014226
N
0.762
e_gw.91.28.1
Branchiostoma floridae
e_gw.91.28.1
I
0.756
CELF1
Tarsius syrichta
ENSTSYG00000003866
N
0.750
CELF1
Pteropus vampyrus
ENSPVAG00000007340
N
0.750
CELF2
Echinops telfairi
ENSETEG00000008414
N
0.748
Celf2
Dipodomys ordii
ENSDORG00000006455
N
0.748
CELF1
Sorex araneus
ENSSARG00000003207
N
0.742
CELF1
Erinaceus europaeus
ENSEEUG00000009782
N
0.742
CELF1
Pan troglodytes
ENSPTRG00000003568
N
0.742
CELF1
Tupaia belangeri
ENSTBEG00000005140
N
0.737
CELF2
Oryzias latipes
ENSORLG00000017111
N
0.734
CELF1
Choloepus hoffmanni
ENSCHOG00000004196
N
0.729
CELF1
Dasypus novemcinctus
ENSDNOG00000009523
N
0.728
CELF1
Myotis lucifugus
ENSMLUG00000016631
N
0.720
CELF2
Otolemur garnettii
ENSOGAG00000005541
N
0.712