CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF2
(
Vicugna pacos
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSVPAG00000009360
T42784_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000008709
RRM
1
29
CCFVTFYTRKAALEAQNALHNIKTLPGMH
ENSVPAP00000008709
RRM
50
118
LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCS
ENSVPAP00000008709
RRM
354
424
LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Vicugna pacos
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF2
Tarsius syrichta
ENSTSYG00000005118
N
1.000
CELF2
Monodelphis domestica
ENSMODG00000016763
N
0.977
CELF1
Tarsius syrichta
ENSTSYG00000003866
N
0.929
CELF1
Pteropus vampyrus
ENSPVAG00000007340
N
0.929
CELF2
Otolemur garnettii
ENSOGAG00000005541
N
0.853
CELF2
Choloepus hoffmanni
ENSCHOG00000002945
N
0.803
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.801
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.797
AAB09041
Xenopus laevis
AAB09041
N
0.797
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.797
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.797
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.797
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.797
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.797
CELF2
Homo sapiens
ENSG00000048740
N
0.797
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.797
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.797
CELF2
Equus caballus
ENSECAG00000006649
N
0.797
Celf2
Mus musculus
ENSMUSG00000002107
N
0.797
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.797
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.797
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.797
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.797
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.797
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.797
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.797
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.797
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.797
AAH45035
Xenopus laevis
AAH45035
N
0.797
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.797
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.797
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.797
celf2
Danio rerio
ENSDARG00000002131
N
0.783
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.783
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.779
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.770
ACH69783
Xenopus laevis
ACH69783
N
0.764
CELF1
Meleagris gallopavo
ENSMGAG00000010629
N
0.750
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
0.750
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
0.750
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.745
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.745
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.745
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.743
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.741
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.741
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.741
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.741
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.741
CELF1
Equus caballus
ENSECAG00000007741
N
0.741
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.741
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.741
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.741
CELF1
Homo sapiens
ENSG00000149187
N
0.741
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.741
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.741
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.741
Celf1
Mus musculus
ENSMUSG00000005506
N
0.736
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.736
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.731
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.726
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.726
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.723
CELF2
Takifugu rubripes
ENSTRUG00000016905
N
0.723
CELF2
Tetraodon nigroviridis
ENSTNIG00000016009
N
0.723
AAI08575
Xenopus laevis
AAI08575
N
0.722
AAC41243
Xenopus laevis
AAC41243
N
0.722
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.722
O57406
Xenopus laevis
O57406
N
0.722
celf1
Danio rerio
ENSDARG00000005315
N
0.717
CELF2
Oryzias latipes
ENSORLG00000003894
N
0.714
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.708
AAH70706
Xenopus laevis
AAH70706
N
0.708
Q6PF35
Xenopus laevis
Q6PF35
N
0.708
AAH57743
Xenopus laevis
AAH57743
N
0.708