SRSF10 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000007691 T40150_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.859
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.859
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.859
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.859
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000009635 RRM 12 82

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_153000026 Daphnia pulex fgenesh1_pg.C_scaffold_153000026 N 0.000
fgenesh1_pg.C_scaffold_189000020 Daphnia pulex fgenesh1_pg.C_scaffold_189000020 N 0.000
fgenesh1_pg.C_scaffold_231000002 Daphnia pulex fgenesh1_pg.C_scaffold_231000002 N 0.000
fgenesh1_pg.C_scaffold_342000018 Capitella teleta fgenesh1_pg.C_scaffold_342000018 N 0.000
fgenesh1_pg.C_scaffold_56000077 Daphnia pulex fgenesh1_pg.C_scaffold_56000077 N 0.000
fgenesh1_pg.C_scaffold_57000009 Daphnia pulex fgenesh1_pg.C_scaffold_57000009 N 0.000
fgenesh1_pg.C_scaffold_79000076 Daphnia pulex fgenesh1_pg.C_scaffold_79000076 N 0.000
fgenesh1_pg.C_scaffold_88000003 Phytophthora ramorum fgenesh1_pg.C_scaffold_88000003 N 0.000
fgenesh1_pg.C_scaffold_889000001 Daphnia pulex fgenesh1_pg.C_scaffold_889000001 N 0.000
NCBI_GNO_1200073 Daphnia pulex NCBI_GNO_1200073 N 0.000
NCBI_GNO_138400002 Daphnia pulex NCBI_GNO_138400002 N 0.000
NCBI_GNO_20100005 Daphnia pulex NCBI_GNO_20100005 N 0.000
NCBI_GNO_24900010 Daphnia pulex NCBI_GNO_24900010 N 0.000
NCBI_GNO_278600001 Daphnia pulex NCBI_GNO_278600001 N 0.000
NCBI_GNO_5000074 Daphnia pulex NCBI_GNO_5000074 N 0.000
NCBI_GNO_520200001 Daphnia pulex NCBI_GNO_520200001 N 0.000
NCBI_GNO_6900015 Daphnia pulex NCBI_GNO_6900015 N 0.000
NCBI_GNO_87600001 Daphnia pulex NCBI_GNO_87600001 N 0.000