CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Pan troglodytes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPTRG00000008261
T40683_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.990
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000014104
RRM
247
315
VRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI
ENSPTRP00000014104
RRM
372
420
VTGGAEGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIE
ENSPTRP00000014104
RRM
465
537
VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVE
Links
Other
RRM
family RBPs
Other
Pan troglodytes
RBPs
65 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH44002
Xenopus laevis
AAH44002
I
0.713
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
0.974
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.722
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
1.000
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.727
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.727
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.727
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.722
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.722
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.722
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.718
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.713
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.713
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.722
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.727
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.713
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.727
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.722
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.722
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.726
ESRP1
Homo sapiens
ENSG00000104413
I
0.727
ESRP1
Felis catus
ENSFCAG00000009920
I
0.722
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.713
esrp1
Danio rerio
ENSDARG00000011245
I
0.708
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.722
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.722
ESRP1
Equus caballus
ENSECAG00000000784
I
0.722
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.722
esrp2
Danio rerio
ENSDARG00000018814
I
0.708
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.869
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.860
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.874
ESRP2
Pteropus vampyrus
ENSPVAG00000016626
I
0.907
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.860
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.870
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.874
ESRP2
Canis familiaris
ENSCAFG00000020320
I
0.974
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.963
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.969
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.713
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.984
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.755
ESRP2
Homo sapiens
ENSG00000103067
D
0.990
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.792
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.990
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.722
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.879
ESRP2
Felis catus
ENSFCAG00000010419
I
0.974
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.948
ESRP2
Erinaceus europaeus
ENSEEUG00000014033
I
0.969
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.995
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.767
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.963
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.851
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.855
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.722
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.969
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.727
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.995
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.722
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.713
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.713
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.713
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.713
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.718