CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPA3
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000017108
T41820_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000014873
RRM
10
78
LFPRGLSFETTDNNLREHFERWGTLTGCVIMRAQTKHSRGFGFMTFSCAEEVNAAMYSWPHKVDGHVVE
ENSTBEP00000014873
RRM
100
168
IFVGGIKKDTEEHNLRDDFQMFGKIETIDVMVDRQSGKRGFGFVTFDDHHTVDKIVVQKYLTINGHNCE
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
D3ZB90_RAT
Rattus norvegicus
ENSRNOG00000038392
N
0.716
ENSCAFG00000023240
Canis familiaris
ENSCAFG00000023240
I
0.705
ENSPPYG00000001326
Pongo pygmaeus
ENSPPYG00000001326
I
0.734
HNRNPA3
Anolis carolinensis
ENSACAG00000012234
I
0.703