ENSTNIG00000005668 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000005668 T42036_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
rbm4.3
M212_0.6 		Danio rerio ACGRCG RNAcompete
Ray et al.(2013)
RNCMPT00248 		0.829
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000008375 RRM 4 66
ENSTNIP00000008375 RRM 82 141

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSGACG00000019980 Gasterosteus aculeatus ENSGACG00000019980 I 0.748
ENSORLG00000011589 Oryzias latipes ENSORLG00000011589 I 0.840
ENSORLG00000012473 Oryzias latipes ENSORLG00000012473 I 0.824
ENSTRUG00000010623 Takifugu rubripes ENSTRUG00000010623 I 0.992
rbm4.3 Danio rerio ENSDARG00000022129 D 0.829