ENSORLG00000011589 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000011589 T40193_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
rbm4.3
M212_0.6 		Danio rerio ACGRCG RNAcompete
Ray et al.(2013)
RNCMPT00248 		0.732
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000014520 RRM 4 66
ENSORLP00000014520 RRM 87 142
ENSORLP00000014523 RRM 4 66
ENSORLP00000014523 RRM 80 141

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSORLG00000012473 Oryzias latipes ENSORLG00000012473 I 0.968
ENSTNIG00000005668 Tetraodon nigroviridis ENSTNIG00000005668 I 0.840
ENSTRUG00000010623 Takifugu rubripes ENSTRUG00000010623 I 0.832
rbm4.3 Danio rerio ENSDARG00000022129 D 0.752
ENSGACG00000019980 Gasterosteus aculeatus ENSGACG00000019980 I 0.700