CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TNRC6B
(
Tarsius syrichta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTSYG00000011836
T42498_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000010902
RRM
1572
1636
LVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Tarsius syrichta
RBPs
115 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCAFG00000023462
Canis familiaris
ENSCAFG00000023462
N
0.000
ENSCHOG00000001614
Choloepus hoffmanni
ENSCHOG00000001614
N
0.000
ENSCJAG00000002042
Callithrix jacchus
ENSCJAG00000002042
N
0.000
ENSDARG00000078651
Danio rerio
ENSDARG00000078651
N
0.000
ENSDORG00000008260
Dipodomys ordii
ENSDORG00000008260
N
0.000
HNRNPH1
Gasterosteus aculeatus
ENSGACG00000018352
I
0.000
HNRNPH1
Tetraodon nigroviridis
ENSTNIG00000008997
N
0.000
Hnrnph3
Dipodomys ordii
ENSDORG00000011470
N
0.000
LOC100392844
Callithrix jacchus
ENSCJAG00000019154
N
0.000