XM_002894151.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh2_kg.1__4049__AT1G49600.1 T44493_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
gw1.219.6.1_CONSTRUCT
M199_0.6 		RNAcompete CONSTRUCTS UGUUUUD RNAcompete
Ray et al.(2013)
RNCMPT00229 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__4049__AT1G49600.1 RRM 126 195
fgenesh2_kg.1__4049__AT1G49600.1 RRM 220 291
fgenesh2_kg.1__4049__AT1G49600.1 RRM 334 398

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G01080 Arabidopsis thaliana AT1G01080-TAIR-G N 0.000
XM_002889340.1 Arabidopsis lyrata Al_scaffold_0001_125 N 0.000