CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LOC_Os04g50790
(
Oryza sativa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
LOC_Os04g50790
T45026_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LOC_Os04g50790.1
RRM
9
74
VKVSNVSLKASLRDVKEFFSFSGDIVHVEMQSSDELSQVAYITFKDNQGSETAMLLTGATIVDMAV
LOC_Os04g50790.2
RRM
9
73
VKVSNVSLKASLRDVKEFFSFSGDIVHVEMQSDELSQVAYITFKDNQGSETAMLLTGATIVDMAV
Links
Other
RRM
family RBPs
Other
Oryza sativa
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCLIV_052200
Neospora caninum
NCLIV_052200
N
0.000
TGGT1_125970
Toxoplasma gondii
TGGT1_125970
N
0.000
TGVEG_030660
Toxoplasma gondii
TGVEG_030660
N
0.000