cassava8085.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava8085.valid.m1 T49479_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava8085.valid.m1 RRM 92 165

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.000
AAH41241 Xenopus laevis AAH41241 I 0.000
AAH84195 Xenopus laevis AAH84195 I 0.000
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.000
CAB50743 Xenopus laevis CAB50743 I 0.000
CAD29864 Xenopus laevis CAD29864 I 0.000
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.000
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.000
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.000
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.000
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.000
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.000
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.000
LOC100050579 Equus caballus ENSECAG00000002544 I 0.000
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.000
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.000
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.000
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.000
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.000
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.000
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.000
PCBP1 Homo sapiens ENSG00000169564 D 0.000
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.000
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.000
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.000
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.000
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.000
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.000
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.000
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.000
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.000
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.000
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.000
PCBP2 Equus caballus ENSECAG00000022389 I 0.000
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.000
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.000
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.000
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.000
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.000
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.000
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.000
PCBP2 Homo sapiens ENSG00000197111 D 0.000
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.000
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.000
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.000