e_gw.57.85.1 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw.57.85.1 T50223_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw.57.85.1 RRM 49 117
e_gw.57.85.1 RRM 146 216
e_gw.57.85.1 RRM 404 436

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH75146 Xenopus laevis AAH75146 N 0.704
AAH77813 Xenopus laevis AAH77813 N 0.714
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.709
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.709
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.709
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.709
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.709
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.716
RBM23 Oryzias latipes ENSORLG00000010370 N 0.707
RBM23 Oryzias latipes ENSORLG00000009919 N 0.711
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.716
RBM39 Microcebus murinus ENSMICG00000001668 N 0.709
RBM39 Sus scrofa ENSSSCG00000007309 N 0.709
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.805
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.712
RBM39 Equus caballus ENSECAG00000013423 N 0.709
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.709
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.709
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.714
RBM39 Canis familiaris ENSCAFG00000008327 N 0.709
RBM39 Sorex araneus ENSSARG00000007673 N 0.709
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.709
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.705
Rbm39 Mus musculus ENSMUSG00000027620 N 0.709
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.707
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.709
RBM39 Gallus gallus ENSGALG00000001550 N 0.712
RBM39 Homo sapiens ENSG00000131051 N 0.709
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.709
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.709
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.712
rbm39a Danio rerio ENSDARG00000011613 N 0.706
rbm39b Danio rerio ENSDARG00000041853 N 0.711