AAH77813 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH77813 T59552_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAH77813 RRM 154 222
AAH77813 RRM 251 321
AAH77813 RRM 455 512

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.985
RBM39 Homo sapiens ENSG00000131051 N 0.960
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.960
RBM39 Sorex araneus ENSSARG00000007673 N 0.960
RBM39 Equus caballus ENSECAG00000013423 N 0.960
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.960
RBM39 Microcebus murinus ENSMICG00000001668 N 0.960
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.960
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.960
Rbm39 Mus musculus ENSMUSG00000027620 N 0.960
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.960
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.960
RBM39 Sus scrofa ENSSSCG00000007309 N 0.960
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.960
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.960
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.960
RBM39 Canis familiaris ENSCAFG00000008327 N 0.960
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.960
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.960
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.960
AAH75146 Xenopus laevis AAH75146 N 0.955
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.955
RBM39 Gallus gallus ENSGALG00000001550 N 0.955
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.950
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.949
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.934
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.889
RBM23 Oryzias latipes ENSORLG00000009919 N 0.889
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.884
rbm39a Danio rerio ENSDARG00000011613 N 0.879
rbm39b Danio rerio ENSDARG00000041853 N 0.879
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.869
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.864
RBM23 Oryzias latipes ENSORLG00000010370 N 0.864
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.859
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.854
RBM39 Procavia capensis ENSPCAG00000008764 N 0.848
RBM39 Echinops telfairi ENSETEG00000016295 N 0.848
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.845
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.834
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.793
PHUM394230 Pediculus humanus PHUM394230 N 0.775
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.763
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.760
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.759
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.759
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.759
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.759
AAEL005046 Aedes aegypti AAEL005046 N 0.756
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.750
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.744
AGAP008433 Anopheles gambiae AGAP008433 N 0.740
RBM39 Dasypus novemcinctus ENSDNOG00000025219 N 0.722
GH13506 Drosophila grimshawi FBgn0120982 N 0.720
GK15272 Drosophila willistoni FBgn0217277 N 0.720
GE14328 Drosophila yakuba FBgn0231943 N 0.719
e_gw.57.85.1 Branchiostoma floridae e_gw.57.85.1 N 0.714
GD23448 Drosophila simulans FBgn0194830 N 0.714
GG10454 Drosophila erecta FBgn0102763 N 0.714
CG11266 Drosophila melanogaster FBgn0031883 N 0.714
GM16278 Drosophila sechellia FBgn0171194 N 0.714
GF14957 Drosophila ananassae FBgn0091982 N 0.714
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.709
GJ18017 Drosophila virilis FBgn0205182 N 0.706
GI10246 Drosophila mojavensis FBgn0133011 N 0.705
fgenesh1_pg.scaffold_245000036 Nematostella vectensis fgenesh1_pg.scaffold_245000036 N 0.705