mgf005614m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf005614m T53623_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf005614m RRM 129 199

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30169.m006469 Ricinus communis 30169.m006469 N 0.831
A9PCB0_POPTR Populus trichocarpa POPTR_0001s26260 N 0.746
A9PID5_POPTR Populus trichocarpa POPTR_0009s05550 N 0.732
AC233958.1_FG002 Zea mays AC233958.1_FG002 N 0.775
B9H9K0_POPTR Populus trichocarpa POPTR_0006s04690 N 0.718
BGIOSIBCE017506 Oryza indica BGIOSIBCE017506 N 0.789
BRADI2G13390 Brachypodium distachyon BRADI2G13390 N 0.803
BRADI2G36710 Brachypodium distachyon BRADI2G36710 N 0.803
cassava2157.valid.m1 Manihot esculenta cassava2157.valid.m1 N 0.859
cassava30654.valid.m1 Manihot esculenta cassava30654.valid.m1 N 0.803
chr2.CM0018.160.nd Lotus japonicus chr2.CM0018.160.nd N 0.761
Cucsa.055310 Cucumis sativus Cucsa.055310 N 0.845
EuGene.0600010284 Ostreococcus RCC809 EuGene.0600010284 N 0.704
e_gw1.136.78.1 Physcomitrella patens e_gw1.136.78.1 N 0.746
e_gw1.31.212.1 Physcomitrella patens e_gw1.31.212.1 N 0.775
Glyma01g43710.1 Glycine max Glyma01g43710.1 N 0.761
Glyma11g01770.1 Glycine max Glyma11g01770.1 N 0.761
GRMZM2G172399 Zea mays GRMZM2G172399 N 0.775
GSVIVG00026504001 Vitis vinifera GSVIVG00026504001 N 0.817
LOC_Os05g04850 Oryza sativa LOC_Os05g04850 N 0.789
MDP0000238271 Malus x domestica MDP0000238271 N 0.761
MDP0000242810 Malus x domestica MDP0000242810 N 0.761
MDP0000242811 Malus x domestica MDP0000242811 N 0.761
MDP0000279392 Malus x domestica MDP0000279392 N 0.746
MDP0000749149 Malus x domestica MDP0000749149 N 0.746
Medtr5g008930 Medicago truncatula Medtr5g008930 N 0.732
mgf001224m Mimulus guttatus mgf001224m N 0.859
PK01699.1 Cannabis sativa PK01699.1 N 0.817
ppa007553m Prunus persica ppa007553m N 0.775
SB03G015351 Sorghum bicolor Sb03g015351 N 0.775
SB09G003130 Sorghum bicolor Sb09g003130 N 0.789
XM_002894275.1 Arabidopsis lyrata scaffold_104917.1 N 0.775