e_gw1.31.212.1 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.31.212.1 T49939_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.31.212.1 RRM 110 180

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.136.78.1 Physcomitrella patens e_gw1.136.78.1 N 0.958
PK01699.1 Cannabis sativa PK01699.1 N 0.831
GSVIVG00026504001 Vitis vinifera GSVIVG00026504001 N 0.817
e_gw1.23.492.1 Selaginella moellendorfii e_gw1.23.492.1 N 0.803
MDP0000238271 Malus x domestica MDP0000238271 N 0.789
MDP0000242810 Malus x domestica MDP0000242810 N 0.789
cassava2157.valid.m1 Manihot esculenta cassava2157.valid.m1 N 0.789
Glyma11g01770.1 Glycine max Glyma11g01770.1 N 0.789
MDP0000242811 Malus x domestica MDP0000242811 N 0.789
Glyma01g43710.1 Glycine max Glyma01g43710.1 N 0.789
MDP0000749149 Malus x domestica MDP0000749149 N 0.775
MDP0000279392 Malus x domestica MDP0000279392 N 0.775
ppa007553m Prunus persica ppa007553m N 0.775
XM_002894275.1 Arabidopsis lyrata scaffold_104917.1 N 0.775
Cucsa.055310 Cucumis sativus Cucsa.055310 N 0.775
30169.m006469 Ricinus communis 30169.m006469 N 0.775
EuGene.0000060244 Micromonas pusilla EuGene.0000060244 N 0.775
chr2.CM0018.160.nd Lotus japonicus chr2.CM0018.160.nd N 0.775
mgf005614m Mimulus guttatus mgf005614m N 0.775
mgf001224m Mimulus guttatus mgf001224m N 0.761
LOC_Os05g04850 Oryza sativa LOC_Os05g04850 N 0.761
BGIOSIBCE017506 Oryza indica BGIOSIBCE017506 N 0.761
BRADI2G36710 Brachypodium distachyon BRADI2G36710 N 0.761
Medtr5g008930 Medicago truncatula Medtr5g008930 N 0.761
BRADI2G13390 Brachypodium distachyon BRADI2G13390 N 0.746
EuGene.0600010284 Ostreococcus RCC809 EuGene.0600010284 N 0.746
cassava30654.valid.m1 Manihot esculenta cassava30654.valid.m1 N 0.746
A9PID5_POPTR Populus trichocarpa POPTR_0009s05550 N 0.732
SB03G015351 Sorghum bicolor Sb03g015351 N 0.732
A9PCB0_POPTR Populus trichocarpa POPTR_0001s26260 N 0.732
gwEuk.6.623.1 Ostreococcus lucimarinus gwEuk.6.623.1 N 0.732
estExt_fgenesh2_pg.C_4600002 Branchiostoma floridae estExt_fgenesh2_pg.C_4600002 I 0.718
e_gw1.06.00.460.1 Ostreococcus tauri e_gw1.06.00.460.1 N 0.718
e_gw1.6.577.1 Heterobasidion annosum e_gw1.6.577.1 N 0.718
e_gw.589.3.1 Branchiostoma floridae e_gw.589.3.1 I 0.718
estExtDG_est_orfs.C_450003 Emiliania huxleyi estExtDG_est_orfs.C_450003 N 0.704
CC1G_08323 Coprinopsis cinerea CC1G_08323 N 0.704
estExtDG_est_orfs.C_980012 Emiliania huxleyi estExtDG_est_orfs.C_980012 N 0.704
AC233958.1_FG002 Zea mays AC233958.1_FG002 N 0.704
GRMZM2G172399 Zea mays GRMZM2G172399 N 0.704
Y14 Arabidopsis thaliana AT1G51510-TAIR-G N 0.704
estExt_fgeneshTA2_pg.C_30296 Trichoplax adhaerens estExt_fgeneshTA2_pg.C_30296 N 0.704