CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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mgf012866m
(
Mimulus guttatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
mgf012866m
T53716_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf012866m
RRM
1
40
MYDQQTNRPRGFGFISFDSEDAVDRVLHKTFHDLSGKQVE
Links
Other
RRM
family RBPs
Other
Mimulus guttatus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
29637.m000760
Ricinus communis
29637.m000760
N
0.800
Medtr2g030270
Medicago truncatula
Medtr2g030270
N
0.725
mgf015744m
Mimulus guttatus
mgf015744m
N
1.000
PDK_20s1691521g001
Phoenix dactylifera
PDK_20s1691521g001
N
0.700
PDK_20s1830981g001
Phoenix dactylifera
PDK_20s1830981g001
N
0.725