CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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29637.m000760
(
Ricinus communis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
29637.m000760
T48666_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
29637.m000760
RRM
1
40
MFDQQTQRPRGFGFITFDAEDAVDRVLHKVFHELNGKLVE
Links
Other
RRM
family RBPs
Other
Ricinus communis
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
mgf012866m
Mimulus guttatus
mgf012866m
N
0.800
mgf015744m
Mimulus guttatus
mgf015744m
N
0.800
PDK_20s1691521g001
Phoenix dactylifera
PDK_20s1691521g001
N
0.750
Medtr2g030270
Medicago truncatula
Medtr2g030270
N
0.750
PDK_20s1830981g001
Phoenix dactylifera
PDK_20s1830981g001
N
0.725