CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AB04906.1
(
Alternaria brassicicola
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AB04906.1
T55412_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB04906.1
RRM
125
203
VYVTGLTPTIREDELLKTLRGDDYFGQYGKILKIVVSKAKENAQHQQSVGVYVTFARKEDAEKCINAVDGSQNGERTLR
Links
Other
RRM
family RBPs
Other
Alternaria brassicicola
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BC1G_04334
Botrytis cinerea
BC1G_04334
N
0.722
EAT86213.2
Phaeosphaeria nodorum
EAT86213.2
N
0.861
estExt_fgenesh1_pg.C_11480
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_11480
N
0.747
estExt_fgenesh1_pg.C_chr_40476
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_40476
N
0.734
e_gw1.11.630.1
Cochliobolus heterostrophus C5
e_gw1.11.630.1
N
0.949
PTRG_01476
Pyrenophora tritici repentis
PTRG_01476
N
0.987
SNOG_06382
Stagonospora nodorum
SNOG_06382
N
0.861