CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ame_R017769
(
Ailuropoda melanoleuca
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Ame_R017769
T55641_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R017769
RRM
1004
1068
VSVEGLSSSTTDVQLKNLLMSVGPIQSLQMLPQQRKAIAKFKEPAHALAFQQKFHRHMIDLSHIN
Links
Other
RRM
family RBPs
Other
Ailuropoda melanoleuca
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_03172
Puccinia graminis
PGTG_03172
N
0.000
PGTG_03348
Puccinia graminis
PGTG_03348
N
0.000
PGTG_05307
Puccinia graminis
PGTG_05307
N
0.000
PGTG_05406
Puccinia graminis
PGTG_05406
N
0.000
PGTG_05408
Puccinia graminis
PGTG_05408
N
0.000
PGTG_09834
Puccinia graminis
PGTG_09834
N
0.000
PGTG_12045
Puccinia graminis
PGTG_12045
N
0.000
PGTG_15116
Puccinia graminis
PGTG_15116
N
0.000
PGTG_18613
Puccinia graminis
PGTG_18613
N
0.000
PGTG_20442
Puccinia graminis
PGTG_20442
N
0.000
PTTG_01003
Puccinia triticina
PTTG_01003
N
0.000
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.000
PTTG_05387
Puccinia triticina
PTTG_05387
N
0.000
PTTG_06677
Puccinia triticina
PTTG_06677
N
0.000
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.000
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.000
PTTG_07232
Puccinia triticina
PTTG_07232
N
0.000
PTTG_07469
Puccinia triticina
PTTG_07469
N
0.000
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.000
PTTG_08960
Puccinia triticina
PTTG_08960
N
0.000
PTTG_09070
Puccinia triticina
PTTG_09070
N
0.000
PTTG_09362
Puccinia triticina
PTTG_09362
N
0.000
PTTG_09789
Puccinia triticina
PTTG_09789
N
0.000
PTTG_10119
Puccinia triticina
PTTG_10119
N
0.000
PTTG_10278
Puccinia triticina
PTTG_10278
N
0.000
PTTG_10751
Puccinia triticina
PTTG_10751
N
0.000
PTTG_11057
Puccinia triticina
PTTG_11057
N
0.000
PTTG_11204
Puccinia triticina
PTTG_11204
N
0.000