MDP0000548950 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000548950 T57686_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.809
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000548950 RRM 22 89

Links

Other RRM family RBPs
Other Malus x domestica RBPs

109 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_212000013 Daphnia pulex fgenesh1_pg.C_scaffold_212000013 N 0.000
fgenesh1_pg.C_scaffold_26000082 Daphnia pulex fgenesh1_pg.C_scaffold_26000082 N 0.000
fgenesh1_pg.C_scaffold_421000001 Daphnia pulex fgenesh1_pg.C_scaffold_421000001 N 0.000
fgenesh1_pg.C_scaffold_601000001 Daphnia pulex fgenesh1_pg.C_scaffold_601000001 N 0.000
fgenesh1_pg.C_scaffold_93000071 Daphnia pulex fgenesh1_pg.C_scaffold_93000071 N 0.000
Genemark.8306_g Serpula lacrymans Genemark.8306_g N 0.000
LjSGA_056739.1 Lotus japonicus LjSGA_056739.1 N 0.000
LjSGA_072359.1 Lotus japonicus LjSGA_072359.1 N 0.000
LjSGA_073314.1 Lotus japonicus LjSGA_073314.1 N 0.000
LjSGA_077546.1 Lotus japonicus LjSGA_077546.1 N 0.000
LjSGA_083550.1 Lotus japonicus LjSGA_083550.1 N 0.000
LjSGA_088344.1 Lotus japonicus LjSGA_088344.1 N 0.000
LjSGA_091651.1 Lotus japonicus LjSGA_091651.1 N 0.000
LjSGA_114624.1 Lotus japonicus LjSGA_114624.1 N 0.000
LjSGA_115869.1 Lotus japonicus LjSGA_115869.1 N 0.000
LjSGA_118711.1 Lotus japonicus LjSGA_118711.1 N 0.000
LjSGA_120238.1 Lotus japonicus LjSGA_120238.1 N 0.000
LjSGA_129847.1 Lotus japonicus LjSGA_129847.1 N 0.000
LjSGA_130508.1 Lotus japonicus LjSGA_130508.1 N 0.000
LjSGA_132918.1 Lotus japonicus LjSGA_132918.1 N 0.000
LjSGA_133570.1 Lotus japonicus LjSGA_133570.1 N 0.000
LjSGA_136986.1.1 Lotus japonicus LjSGA_136986.1.1 N 0.000
Minc00264 Meloidogyne incognita Minc00264 N 0.000
Minc02053 Meloidogyne incognita Minc02053 N 0.000
SNAP_00021967 Daphnia pulex SNAP_00021967 N 0.000
SNAP_00029886 Daphnia pulex SNAP_00029886 N 0.000
SNAP_00039286 Daphnia pulex SNAP_00039286 N 0.000
SNAP_00040202 Daphnia pulex SNAP_00040202 N 0.000