CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PMAA_002860
(
Penicillium marneffei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PMAA_002860
T58248_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_002860.t1
RRM
101
166
LFISELFWWTTDDDIRGWINEAHAEDELKDVTFSEHKVNGKSKSQAYVEFTTLQAATAVKHLIEHY
Links
Other
RRM
family RBPs
Other
Penicillium marneffei
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_034850
Aspergillus clavatus
CADACLAG00004062
N
0.761
AFUA_3G06890
Aspergillus fumigatus
CADAFUAG00005682
N
0.761
BC1G_15622
Botrytis cinerea
BC1G_15622
N
0.704
CIMG_00383
Coccidioides immitis
CIMG_00383
N
0.725
CPSG_05134
Coccidioides posadasii
CPSG_05134
N
0.710
fgenesh1_pg.1_#_1066
Myceliophthora thermophila
fgenesh1_pg.1_#_1066
N
0.727
GLRG_04675
Colletotrichum graminicola
GLRG_04675
N
0.700
HCAG_07243
Histoplasma capsulatum
HCAG_07243
N
0.704
NFIA_070360
Neosartorya fischeri
CADNFIAG00005684
N
0.761
Pa_1_17560
Podospora anserina
Pa_1_17560
N
0.758