CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PMAA_020170
(
Penicillium marneffei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PMAA_020170
T58260_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_020170.t1
RRM
1
31
MNGFGFIEYEDAMDARDVVPDGSDFKGERLT
PMAA_020170.t1
RRM
64
129
QVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGRGFVEFESHADLKTAVEKLDGRELKGSQVT
Links
Other
RRM
family RBPs
Other
Penicillium marneffei
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFUA_3G10100
Aspergillus fumigatus
CADAFUAG00005849
N
0.755
BDBG_06361
Blastomyces dermatitidis
BDBG_06361
N
0.816
NFIA_067190
Neosartorya fischeri
CADNFIAG00005682
N
0.838