CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BDBG_06361
(
Blastomyces dermatitidis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BDBG_06361
T28313_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BDBG_06361T0
RRM
1
31
MSGFGFIEYEDAMDAKDVVPDGTDFKGERLT
BDBG_06361T0
RRM
65
126
ISGLPETSWQDLKDFARQSGLDVVYSETGHDGRGFVEFETGSDLKTAVEKLDGREFKGSRVL
Links
Other
RRM
family RBPs
Other
Blastomyces dermatitidis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NFIA_067190
Neosartorya fischeri
CADNFIAG00005682
N
0.835
PMAA_020170
Penicillium marneffei
PMAA_020170
N
0.816
HCAG_00086
Histoplasma capsulatum
HCAG_00086
N
0.752
AFUA_3G10100
Aspergillus fumigatus
CADAFUAG00005849
N
0.750