CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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O57437
(
Xenopus laevis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
O57437
T59709_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
O57437
RRM
35
102
VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDEVDVQKIVKSQISFHGKKLK
Links
Other
RRM
family RBPs
Other
Xenopus laevis
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
28872.m000243
Ricinus communis
28872.m000243
N
0.000
B9HUM6_POPTR
Populus trichocarpa
POPTR_0010s23710
N
0.000
Cucsa.308810
Cucumis sativus
Cucsa.308810
N
0.000
Glyma10g34220.1
Glycine max
Glyma10g34220.1
N
0.000
Glyma20g33330.1
Glycine max
Glyma20g33330.1
N
0.000
GSVIVG00016165001
Vitis vinifera
GSVIVG00016165001
N
0.000
ppa009068m
Prunus persica
ppa009068m
N
0.000
ppa009568m
Prunus persica
ppa009568m
N
0.000