CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC17
(
Loxodonta africana
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSLAFG00000015364
T60397_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000012871
S1
13
88
PALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRMKVSLSMK
ENSLAFP00000023787
S1
1
47
GLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRMKVSLSMK
Links
Other
S1
family RBPs
Other
Loxodonta africana
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh2_pg.scaffold_127000006
Branchiostoma floridae
fgenesh2_pg.scaffold_127000006
N
0.000
fgenesh2_pg.scaffold_9000128
Branchiostoma floridae
fgenesh2_pg.scaffold_9000128
N
0.000
ISCW016264
Ixodes scapularis
ISCW016264
N
0.000