fgenesh2_pg.scaffold_127000006 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh2_pg.scaffold_127000006 T52215_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_127000006 RRM 255 318

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSTNIG00000000334 Tetraodon nigroviridis ENSTNIG00000000334 I 0.750
fgenesh2_pg.scaffold_9000128 Branchiostoma floridae fgenesh2_pg.scaffold_9000128 N 0.750
e_gw.517.22.1 Branchiostoma floridae e_gw.517.22.1 N 0.734
ENSORLG00000003144 Oryzias latipes ENSORLG00000003144 I 0.719
zgc:55733 Danio rerio ENSDARG00000022579 I 0.703
fgenesh2_pg.scaffold_6000171 Branchiostoma floridae fgenesh2_pg.scaffold_6000171 I 0.703