CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDC2
(
Erinaceus europaeus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSEEUG00000008580
T62012_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000007886
YTH
1320
1402
LVFSVQGSGHFQFSRMSSEIGKEKSQDWGSAGLGGVFKVEIRKESLPFQFAHHLLNHDQKQISRDGELEPQVGEQLLQLWERL
Links
Other
YTH
family RBPs
Other
Erinaceus europaeus
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os12g19620
Oryza sativa
LOC_Os12g19620
N
0.000
PGTG_01711
Puccinia graminis
PGTG_01711
N
0.000
PGTG_08804
Puccinia graminis
PGTG_08804
N
0.000
PGTG_09249
Puccinia graminis
PGTG_09249
N
0.000
PGTG_13387
Puccinia graminis
PGTG_13387
N
0.000
PGTG_14786
Puccinia graminis
PGTG_14786
N
0.000
PTTG_05198
Puccinia triticina
PTTG_05198
N
0.000
PTTG_06540
Puccinia triticina
PTTG_06540
N
0.000