CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDC2
(
Erinaceus europaeus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSEEUG00000008580
T62012_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000007886
YTH
1320
1402
LVFSVQGSGHFQFSRMSSEIGKEKSQDWGSAGLGGVFKVEIRKESLPFQFAHHLLNHDQKQISRDGELEPQVGEQLLQLWERL
Links
Other
YTH
family RBPs
Other
Erinaceus europaeus
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
YTHDC2
Sus scrofa
ENSSSCG00000014211
N
0.736
YTHDC2
Sorex araneus
ENSSARG00000000924
N
0.736
YTHDC2
Pteropus vampyrus
ENSPVAG00000012364
N
0.736
YTHDC2
Echinops telfairi
ENSETEG00000013681
N
0.736
YTHDC2
Tupaia belangeri
ENSTBEG00000006872
N
0.736
YTHDC2
Tarsius syrichta
ENSTSYG00000009634
N
0.736
YTHDC2
Equus caballus
ENSECAG00000020630
N
0.736
YTHDC2
Cavia porcellus
ENSCPOG00000000272
N
0.736
YTHDC2
Callithrix jacchus
ENSCJAG00000016598
N
0.736
YTHDC2
Bos taurus
ENSBTAG00000014099
N
0.736
ENSPPYG00000015691
Pongo pygmaeus
ENSPPYG00000015691
N
0.736
YTHDC2
Pan troglodytes
ENSPTRG00000017143
N
0.736
YTHDC2
Gorilla gorilla
ENSGGOG00000014407
N
0.736
YTHDC2
Macaca mulatta
ENSMMUG00000001376
N
0.736
Ythdc2
Mus musculus
ENSMUSG00000034653
N
0.736
YTHDC2
Oryctolagus cuniculus
ENSOCUG00000012096
N
0.736
YTHDC2
Loxodonta africana
ENSLAFG00000003538
N
0.736
YTHDC2
Canis familiaris
ENSCAFG00000000224
N
0.725
YTHDC2
Homo sapiens
ENSG00000047188
N
0.725
YTHDC2
Macropus eugenii
ENSMEUG00000004414
N
0.725
YTHDC2
Tursiops truncatus
ENSTTRG00000003116
N
0.725
YTHDC2
Monodelphis domestica
ENSMODG00000015671
N
0.725
YTHDC2
Myotis lucifugus
ENSMLUG00000006106
N
0.725
YTHDC2
Ochotona princeps
ENSOPRG00000000462
N
0.725
YTHDC2
Vicugna pacos
ENSVPAG00000007516
N
0.725