XM_002876131.1 (Arabidopsis lyrata)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		fgenesh2_kg.5__1664__AT3G52980.1 T00712_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1664__AT3G52980.1 CCCH ZF 147 167
fgenesh2_kg.5__1664__AT3G52980.1 RRM 292 352

Links

Other CCCH ZF,RRM family RBPs
Other Arabidopsis lyrata RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GF11342 Drosophila ananassae FBgn0088382 N 0.000
GG21791 Drosophila erecta FBgn0113969 N 0.000
eIF3-S9 Drosophila melanogaster FBgn0034237 N 0.000
GI20840 Drosophila mojavensis FBgn0143574 N 0.000
GL11461 Drosophila persimilis FBgn0149070 N 0.000
GA24735-RA Drosophila pseudoobscura FBgn0246121 N 0.000
GM21793 Drosophila sechellia FBgn0176671 N 0.000
GD11284 Drosophila simulans FBgn0183033 N 0.000
GJ20575 Drosophila virilis FBgn0207714 N 0.000
GK21404 Drosophila willistoni FBgn0223396 N 0.000
GE11867 Drosophila yakuba FBgn0229653 N 0.000