CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF11342
(
Drosophila ananassae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0088382
T43207_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0114534
RRM
69
129
EKLKSVINKLFSHCGDIVNVVYPVDEEGKTKGYAFMEYKHASQAEDAVKKLNNHRLDKNHT
Links
Other
RRM
family RBPs
Other
Drosophila ananassae
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GL11461
Drosophila persimilis
FBgn0149070
N
0.967
GA24735-RA
Drosophila pseudoobscura
FBgn0246121
N
0.967
GM21793
Drosophila sechellia
FBgn0176671
N
0.934
GD11284
Drosophila simulans
FBgn0183033
N
0.934
GH20755
Drosophila grimshawi
FBgn0128218
N
0.918
GE11867
Drosophila yakuba
FBgn0229653
N
0.902
GJ20575
Drosophila virilis
FBgn0207714
N
0.902
GI20840
Drosophila mojavensis
FBgn0143574
N
0.885
GK21404
Drosophila willistoni
FBgn0223396
N
0.869
GG21791
Drosophila erecta
FBgn0113969
N
0.852
eIF3-S9
Drosophila melanogaster
FBgn0034237
N
0.836