fgenesh1_pg.C_scaffold_49000019 (Mycosphaerella fijiensis)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		fgenesh1_pg.C_scaffold_49000019 T00935_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_49000019 CCCH ZF 13 39
fgenesh1_pg.C_scaffold_49000019 RRM 72 134
fgenesh1_pg.C_scaffold_49000019 CCCH ZF 142 168

Links

Other CCCH ZF,RRM family RBPs
Other Mycosphaerella fijiensis RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.000
estExtDG_fgenesh_newKGs_kg.C_110065 Emiliania huxleyi estExtDG_fgenesh_newKGs_kg.C_110065 N 0.000
GSPATP00035306001 Paramecium tetraurelia GSPATP00035306001 N 0.000
fgenesh1_pg.C_scaffold_23000018 Phytophthora capsici fgenesh1_pg.C_scaffold_23000018 N 0.000
PITG_12876 Phytophthora infestans PITG_12876 N 0.000
s_467614 Phytophthora sojae s_467614 N 0.000
estExt_Genewise1.C_30147 Volvox carteri estExt_Genewise1.C_30147 N 0.000